SECAT Performance Improvements
Improved the Size-exclusion chromatography toolkit (SECAT) by ~40% through optimizations and multiprocessing support for non-parametric Loess normalization.
I improved the Size-exclusion chromatography toolkit (SECAT) by about 40% through optimizations and multiprocessing support for non-parametric Loess normalization.
The work is in the upstream SECAT repository as a pull request: grosenberger/secat#2.
The method is described in the STAR Protocols paper Network-centric analysis of co-fractionated protein complex profiles using SECAT.